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AT1G06710 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06710" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G06710Pentatricopeptide repeat-containing protein (997 aa)    
Predicted Functional Partners:
nMAT1
Nuclear maturase 1 (711 aa)
     
   
  0.848
AT4G31010
CRS2-associated factor 1; May be involved for the splicing of group IIB introns in mitochondrions (405 aa)
     
   
  0.843
RAD52-2
Uncharacterized protein (199 aa)
           
  0.739
AT4G11876
Uncharacterized protein (43 aa)
           
  0.738
AT4G11390
Cysteine/Histidine-rich C1 domain family protein (514 aa)
           
  0.738
RAD52-1
Radiation sensitive 51-1 (176 aa)
           
  0.710
WTF9
What’s this factor 9 (387 aa)
           
  0.709
NAD4
NADH dehydrogenase subunit 4 (495 aa)
           
  0.677
ABO6
ABA overly sensitive 6 (1161 aa)
     
   
  0.645
AT1G17130
Uncharacterized protein (338 aa)
           
  0.633
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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