STRINGSTRING
GATA10 protein (Arabidopsis thaliana) - STRING interaction network
"GATA10" - GATA transcription factor 10 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA10GATA transcription factor 10; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity) (308 aa)    
Predicted Functional Partners:
AGD15
ARF-GAP domain 15; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF) (232 aa)
       
 
  0.809
GATA27
GATA transcription factor 27; Transcriptional regulator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (470 aa)
           
  0.773
GATA26
GATA transcription factor 26; Transcriptional regulator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (526 aa)
           
  0.738
ZML2
ZIM-LIKE 2; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (302 aa)
           
  0.679
ZML1
ZIM-like 1; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (297 aa)
           
  0.672
GAF1
GAMETOPHYTE DEFECTIVE 1 (705 aa)
           
  0.601
GLT1
Glutamate synthase 1 [NADH]; Involved in glutamate biosynthesis. Required for non- photorespiratory ammonium assimilation. Probably involved in primary ammonium assimilation in roots (2208 aa)
     
   
  0.498
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (1094 aa)
     
 
  0.493
AG
AGAMOUS; Probable transcription factor involved in the control of organ identity during the early development of flowers. Is required for normal development of stamens and carpels in the wild-type flower. Plays a role in maintaining the determinacy of the floral meristem. Acts as C class cadastral protein by repressing the A class floral homeotic genes like APETALA1. Forms a heterodimer via the K-box domain with either SEPALATTA1/AGL2, SEPALATTA2/AGL4, SEPALLATA3/AGL9 or AGL6 that could be involved in genes regulation during floral meristem development. Controls AHL21/GIK, a multifunct [...] (252 aa)
     
  0.473
SUVR5
SU(VAR)3-9-RELATED protein 5; Histone methyltransferase that functions together with its binding partner LDL1/SWP1 as one of the regulators of flower timing in Arabidopsis (PubMed-17224141). Mediates H3K9me2 deposition and regulates gene expression in a DNA methylation- independent manner. Binds DNA through its zinc fingers and represses the expression of a subset of stimulus response genes. May represent a novel mechanism for plants to regulate their chromatin and transcriptional state, which may allow for the adaptability and modulation necessary to rapidly respond to environment or [...] (1382 aa)
       
 
  0.452
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (12%) [HD]