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AT1G09250 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G09250" - Basic helix-loop-helix in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G09250Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Atypical bHLH transcription factor probably unable to bind DNA. Negatively regulates brassinosteroid signaling (207 aa)    
Predicted Functional Partners:
AT2G36690
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Its function is described as oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; Involved in biosynthetic process; Located in cellular_component unknown; Expressed in hypocotyl, root; Contains the following InterPro domains- Oxoglutarate/iron-dependent oxygenase (InterPro-IPR005123); BEST Arabidopsis thaliana protein match is- 2-oxoglutarate (2OG) a [...] (366 aa)
           
  0.768
HTA7
Probable histone H2A.5; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (150 aa)
           
  0.697
RUG1
Regulator of chromosome condensation (RCC1) family protein; Contains the following InterPro domains- Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro-IPR009091), Regulator of chromosome condensation, RCC1 (InterPro-IPR000408); BEST Arabidopsis thaliana protein match is- Regulator of chromosome condensation (RCC1) family protein (TAIR-AT5G63860.1); Has 22297 Blast hits to 6326 proteins in 481 species- Archae - 85; Bacteria - 2816; Metazoa - 7462; Fungi - 1554; Plants - 2765; Viruses - 0; Other Eukaryotes - 7615 (source- NCBI BLink) (434 aa)
           
  0.693
SPA1
Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In add [...] (1029 aa)
           
  0.693
emb1579
ATP/GTP-binding protein family; Embryo defective 1579 (emb1579); Its function is described as binding, calcium ion binding; Involved in embryo development ending in seed dormancy; Located in cytosol; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- EF-HAND 2 (InterPro-IPR018249), EF-hand-like domain (InterPro-IPR011992); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (1340 aa)
           
  0.663
MYB108
Transcription factor MYB108; Transcription factor contributing to the regulation of stamen maturation and male fertility in response to jasmonate signaling. Required for correct timing of anther dehiscence. Acts as a negative regulator of abscisic acid-induced cell death. Not involved in the regulation of BOI. Regulated by MYB21 and at a lower level by MYB24. Negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner (323 aa)
           
  0.651
PRE1
Basic helix-loop-helix (bHLH) DNA-binding family protein; Atypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. Binds IBH1, forming a pair of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation. Regulates light responses by binding and inhibiting the activity of the bHLH transcription factor HFR1, a critical regulator of light signaling and shade avoidance. May have a regulatory role in various aspects of [...] (92 aa)
           
  0.644
NF-YC3
Nuclear transcription factor Y subunit C-3; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters; Belongs to the NFYC/HAP5 subunit family (217 aa)
           
  0.588
NF-YC9
Nuclear transcription factor Y subunit C-9; Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Interacts with REF6 to directly regulate SOC1 transcription in response to flowering signals from photoperiod and gibberellic acid pathways (231 aa)
           
  0.588
AT5G57150
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in nucleus; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Helix-loop-helix DNA-binding domain (InterPro-IPR001092), Helix-loop-helix DNA-binding (InterPro-IPR011598); BEST Arabidopsis thaliana protein match is- basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR-AT4G29930.3) (264 aa)
           
  0.587
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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