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AT1G12290 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12290" - CC-NBS-LRR class disease resistance protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G12290CC-NBS-LRR class disease resistance protein; Probable disease resistance protein (884 aa)    
Predicted Functional Partners:
AT1G63730
TIR-NBS-LRR class disease resistance protein (966 aa)
     
   
  0.868
AT5G46530
AWPM-19-like protein (157 aa)
           
  0.780
CYTC-2
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
     
  0.745
CYTC-1
CYTOCHROME C-1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (114 aa)
     
  0.745
RLM1
RESISTANCE TO LEPTOSPHAERIA MACULANS 1; TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Leptosphaeria maculans (blackleg disease) (997 aa)
           
  0.736
TRM12
Uncharacterized protein (689 aa)
           
  0.717
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
       
 
  0.689
AT2G40860
Putative protein phosphatase 2C 31 (658 aa)
     
  0.687
AT5G11250
TIR-NBS-LRR class disease resistance protein (1189 aa)
           
  0.678
AT3G24530
AAA-type ATPase family protein / ankyrin repeat family protein (481 aa)
       
 
  0.664
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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