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AT1G15770 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15770" - Probable mediator of RNA polymerase II transcription subunit 15b in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G15770Probable mediator of RNA polymerase II transcription subunit 15b; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the [...] (293 aa)    
Predicted Functional Partners:
AT5G52970
Thylakoid lumen 15.0 kDa protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; Expressed in 20 plant structures; Expressed during 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (223 aa)
           
  0.576
MTK
S-methyl-5-thioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate in the methionine cycle. Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis (420 aa)
           
  0.576
AT1G80520
Sterile alpha motif (SAM) domain-containing protein; Contains the following InterPro domains- Sterile alpha motif homology (InterPro-IPR010993), Sterile alpha motif, type 2 (InterPro-IPR011510); BEST Arabidopsis thaliana protein match is- Sterile alpha motif (SAM) domain-containing protein (TAIR-AT1G15760.1); Has 64 Blast hits to 64 proteins in 13 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (192 aa)
           
  0.497
AT1G15760
Sterile alpha motif (SAM) domain-containing protein; Contains the following InterPro domains- Sterile alpha motif homology (InterPro-IPR010993), Sterile alpha motif, type 2 (InterPro-IPR011510); BEST Arabidopsis thaliana protein match is- Sterile alpha motif (SAM) domain-containing protein (TAIR-AT1G80520.1); Has 64 Blast hits to 64 proteins in 13 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (202 aa)
           
  0.497
AT2G27930
PLATZ transcription factor family protein; Contains the following InterPro domains- Protein of unknown function DUF597 (InterPro-IPR006734); BEST Arabidopsis thaliana protein match is- PLATZ transcription factor family protein (TAIR-AT1G32700.1); Has 406 Blast hits to 406 proteins in 26 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 406; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (189 aa)
           
  0.475
AT5G32470
Bifunctional TH2 protein, mitochondrial; May be involved in the salvage of thiamine breakdown products. This protein has a haloacid dehalogenase family domain fused to its TenA domain. Phosphatase with the highest activity against thiamine monophosphate (ThMP) and, with a lower activity, against thiamine diphosphate (ThDP), flavin mononucleotide, inorganic pyrophosphate, CTP and dATP. Has a thiamine salvage hydrolase activity, but only against 4-amino-5- aminomethyl-2-methylpyrimidine (amino-HMP) and not against N- formylamino-HMP, desthiothiamine, thiamine, ThMP, and ThDP (617 aa)
           
  0.474
AT3G23350
ENTH/VHS family protein; Contains the following InterPro domains- Epsin, N-terminal (InterPro-IPR001026), Epsin-like, N-terminal (InterPro-IPR013809), ENTH/VHS (InterPro-IPR008942); BEST Arabidopsis thaliana protein match is- ENTH/VHS family protein (TAIR-AT3G46540.1); Has 1024 Blast hits to 1024 proteins in 183 species- Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 200; Plants - 173; Viruses - 0; Other Eukaryotes - 68 (source- NCBI BLink) (281 aa)
           
  0.474
AT1G63770
Puromycin-sensitive aminopeptidase; Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. Plays an essential role during prophase I of meiosis. Required for correct meiotic reconbination in both male and female gametophytes (1013 aa)
           
  0.474
ABCF1
Member of GCN subfamily; Belongs to the ABC transporter superfamily. ABCF family. EF3 (TC 3.A.1.121) subfamily (595 aa)
           
  0.473
AT4G14305
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in integral to membrane; Contains the following InterPro domains- Mpv17/PMP22 (InterPro-IPR007248); BEST Arabidopsis thaliana protein match is- Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR-AT4G04470.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (185 aa)
           
  0.473
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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