STRINGSTRING
TLP8 protein (Arabidopsis thaliana) - STRING interaction network
"TLP8" - Member of TLP family in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLP8Member of TLP family (398 aa)    
Predicted Functional Partners:
HB51
Homeobox 51; Putative transcription factor (235 aa)
     
   
  0.703
AT5G60630
Uncharacterized protein (139 aa)
           
  0.671
MYB17
Myb domain protein 17 (299 aa)
           
  0.670
AT5G49770
Leucine-rich repeat protein kinase family protein (946 aa)
       
 
  0.636
AT2G19240
RabGAP/TBC domain-containing protein (840 aa)
     
 
  0.615
TSO2
TSO MEANING ’UGLY’ IN CHINESE 2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. Involved in DNA damage repair and programmed cell death inhibition (332 aa)
     
      0.608
AT5G57210
Microtubule-associated protein-related protein (737 aa)
       
 
  0.598
AT4G29950
RabGAP/TBC domain-containing protein (828 aa)
       
 
  0.598
AT2G04620
Cation efflux family protein; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis (798 aa)
       
      0.590
RNR2A
Ribonucleotide reductase 2A; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (341 aa)
       
      0.570
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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