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STRINGSTRING
TLP8 protein (Arabidopsis thaliana) - STRING interaction network
"TLP8" - Tubby-like protein 8 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
TLP8Tubby-like protein 8; Member of TLP family; Belongs to the TUB family (398 aa)    
Predicted Functional Partners:
TLP4
Tubby like protein 4; Member of TLP family (244 aa)
           
  0.809
AT2G04940
Scramblase-related; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion, plastid; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Scramblase (InterPro-IPR005552); Has 427 Blast hits to 416 proteins in 142 species- Archae - 0; Bacteria - 29; Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0; Other Eukaryotes - 19 (source- NCBI BLink) (392 aa)
           
  0.786
AT3G58690
Protein kinase superfamily protein; Its function is described as kinase activity; Involved in protein amino acid phosphorylation; Located in plasma membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein kinase, ATP binding site (InterPro-IPR017441), Serine/threonine-protein kinase domain (InterPro-IPR002290), Serine/threonine-protein kinase-like domain (InterPro-IPR017442), Serine/threonine-protein kinase, active site (InterPro-IPR008271), Protein kinase-like domain (InterPro-IPR011009), Protein kinase, catalytic [...] (400 aa)
       
 
  0.761
AT2G04620
Cation efflux family protein; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis (798 aa)
       
      0.752
APTX
Transcription factor bHLH140; Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro (912 aa)
     
   
  0.664
AT1G59800
Cullin family protein; Its function is described as ubiquitin protein ligase binding; Involved in ubiquitin-dependent protein catabolic process; Located in cullin-RING ubiquitin ligase complex; Contains the following InterPro domains- Cullin, N-terminal (InterPro-IPR001373), Cullin repeat-like-containing domain (InterPro-IPR016159); BEST Arabidopsis thaliana protein match is- Cullin family protein (TAIR-AT1G59790.1); Has 1434 Blast hits to 1434 proteins in 216 species- Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 306; Plants - 271; Viruses - 0; Other Eukaryotes - 128 (source- NCBI BLink) (255 aa)
           
  0.661
AT5G25475
AP2/B3-like transcriptional factor family protein; Its function is described as DNA binding; Involved in regulation of transcription, DNA-dependent; Located in chloroplast; Expressed in 20 plant structures; Expressed during 9 growth stages; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- AP2/B3-like transcriptional factor family protein (TAIR-AT5G25470.2) (324 aa)
           
  0.644
QC
Glutaminyl-peptide cyclotransferase; This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model; Belongs to the plant glutaminyl-peptide cyclotransferase family (320 aa)
           
  0.643
MYB17
Transcription factor MYB41; Transcription factor that may play a role in flower development by repressing ANT. Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (299 aa)
           
  0.638
AT1G11050
Probable receptor-like protein kinase At1g11050; Protein kinase superfamily protein; Its function is described as kinase activity; Involved in protein amino acid phosphorylation; Located in endomembrane system; Expressed in 18 plant structures; Expressed during 10 growth stages; Contains the following InterPro domains- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, catalytic domain (InterPro-IPR000719), Serine/threonine-protein kinase-like domain (InterPro-IPR017442), Protein kinase-like domain (InterPro-IPR011009), Serine/threonine-protein kinase, active site ( [...] (625 aa)
       
 
  0.616
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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