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RKD1 protein (Arabidopsis thaliana) - STRING interaction network
"RKD1" - RWP-RK domain containing 1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
RKD1RWP-RK domain containing 1; Putative transcription factor (269 aa)    
Predicted Functional Partners:
AT5G23330
Riboflavin biosynthesis protein-like protein; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme (354 aa)
       
      0.866
SRD2
SHOOT REDIFFERENTIATION DEFECTIVE 2; Transcription activator of small-nuclear RNA genes (snRNA), which have essential roles in pre-mRNA splicing and rRNA processing. Essential protein involved in the establishment of apical meristems and organ primordia, embryogenesis, cell differentiation and cell proliferation, probably by modulating the establishment of auxin gradients. Participates in the control of competence in cell proliferation; required for the reinitiation of the progression of the cell cycle and subsequent cell proliferation during cell redifferentiation leading to callus fo [...] (386 aa)
           
  0.604
RAP2.4
Related to AP2 4; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (334 aa)
           
  0.600
FMN/FHY
Riboflavin kinase; Bifunctional enzyme that catalyzes the hydrolysis of flavin-mononucleotide (FMN) to riboflavin (vitamin B2) and the phosphorylation of riboflavin to form (FMN) coenzyme (379 aa)
       
      0.599
RID2
Root initiation defective 2 (289 aa)
           
  0.499
LBD15
LOB domain-containing protein 15 (224 aa)
           
  0.491
NAC071
NAC domain containing protein 71 (262 aa)
           
  0.479
LBD33
LOB domain-containing protein 33 (177 aa)
           
  0.450
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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