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NFD5 protein (Arabidopsis thaliana) - STRING interaction network
"NFD5" - NUCLEAR FUSION DEFECTIVE 5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFD5NUCLEAR FUSION DEFECTIVE 5; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (725 aa)    
Predicted Functional Partners:
CYCB2;3
Cyclin B2;3 (429 aa)
     
      0.893
AT1G20370
Pseudouridine synthase-like protein (549 aa)
     
   
  0.719
NFD3
NUCLEAR FUSION DEFECTIVE 3; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (314 aa)
     
   
  0.714
AT1G02370
Pentatricopeptide repeat-containing protein (537 aa)
     
   
  0.699
AT4G02820
Pentatricopeptide repeat-containing protein (532 aa)
     
   
  0.680
NFD1
50S ribosomal protein L21; This protein binds to 23S ribosomal RNA in the presence of protein L20 (By similarity). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus, and during double fertilization of the egg cell and the central cell (PubMed-16698901) (270 aa)
     
   
  0.678
NFD4
NUCLEAR FUSION DEFECTIVE 4; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed-16698901) (582 aa)
           
  0.677
NFD2
NUCLEAR FUSION DEFECTIVE 2; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (191 aa)
           
  0.677
EDA41
Embryo sac development arrest 41 (369 aa)
           
  0.670
AT3G02490
Pentatricopeptide repeat-containing protein (665 aa)
     
   
  0.667
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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