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AT1G20600 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20600" - AP2/B3-like transcriptional factor family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G20600AP2/B3-like transcriptional factor family protein; Its function is described as DNA binding; Involved in regulation of transcription, DNA-dependent; Located in membrane; Expressed in leaf; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- AP2/B3-like transcriptional factor family protein (TAIR-AT4G03170.1); Has 77 Blast hits to 77 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 6 (source- NCBI BLink) (237 aa)    
Predicted Functional Partners:
VIIIA
P-loop containing nucleoside triphosphate hydrolases superfamily protein; Myosin heavy chain that is required for the cell cycle- regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity) (1153 aa)
           
  0.737
AT2G24680
Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- DNA binding;DNA binding;sequence-specific DNA binding transcription factors (TAIR-AT2G24650.1) (471 aa)
           
  0.646
AT4G31630
Putative B3 domain-containing protein REM4; Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in egg cell; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G31615.1); Has 603 Blast hits to 448 proteins in 67 species- Archae - 0; Bacteria - 13; Metazoa - 36; [...] (512 aa)
           
  0.643
AT1G16640
AP2/B3-like transcriptional factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in 16 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- AP2/B3-like transcriptional factor family protein (TAIR-AT3G06220.1); Has 242 Blast hits to 231 proteins in 12 species- Archae - 0; Bacteria [...] (134 aa)
           
  0.623
AT4G31640
Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G31650.1); Has 686 Blast hits to 452 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 0 (source- N [...] (352 aa)
           
  0.575
AT4G31620
Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G31615.1); Has 320 Blast hits to 174 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 320; Viruses - 0; Other Eukaryotes - 0 (source- N [...] (492 aa)
           
  0.561
AT2G24645
Transcriptional factor B3 family protein; Its function is described as DNA binding; Involved in regulation of transcription, DNA-dependent; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G00260.1) (490 aa)
           
  0.559
RTV1
B3 domain-containing protein REM19; Involved in the regulation of vernalization (By similarity). Binds to DNA in vitro in a non-sequence-specific manner. XLG2 promotes the DNA binding activity of RTV1 specifically to promoter regions of FT and SOC1 in vivo and thus leads to the activation of floral integrator genes (226 aa)
           
  0.465
NGA2
AP2/B3-like transcriptional factor family protein; Regulates lateral organ growth. Functionally redundant with NGA1, NGA3 and NGA4 (299 aa)
           
  0.463
XIA
Myosin XI A; Myosin heavy chain that is required for the cell cycle- regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. Plant myosin class XI subfamily (1730 aa)
           
  0.463
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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