STRINGSTRING
AT1G23250 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G23250" - Caleosin-related family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G23250Caleosin-related family protein (205 aa)    
Predicted Functional Partners:
CYP86C2
Encodes a protein with cytochrome P450 domain (541 aa)
     
   
  0.766
cPT8
Cis-prenyltransferase 8; Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein (271 aa)
     
   
  0.746
CYP86C4
Member of CYP86C (529 aa)
     
   
  0.745
AT2G03200
Aspartyl protease-like protein (461 aa)
           
  0.738
cPT9
Cis-prenyltransferase 9; Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein (272 aa)
           
  0.707
GGPS2
Geranylgeranyl pyrophosphate synthase 2; Heterodimeric geranyl(geranyl)-diphosphate (GPP) synthase large subunit. In vitro, the large subunit catalyzes mainly the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate while the small subunit alone is inactive. Upon association of the two subunits, the product profile is not changed (376 aa)
     
   
  0.679
AT1G76470
NAD(P)-binding Rossmann-fold superfamily protein (325 aa)
           
  0.677
AT1G75920
GDSL esterase/lipase EXL5 (353 aa)
     
   
  0.656
GRP20
Glycine-rich protein 20 (153 aa)
     
   
  0.645
CYP86C3
Member of CYP86C (534 aa)
     
   
  0.618
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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