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CAF2 protein (Arabidopsis thaliana) - STRING interaction network
"CAF2" - CRS2-associated factor 2 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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CAF2CRS2-associated factor 2; Essential protein required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (564 aa)    
Predicted Functional Partners:
CRS1
Ortholog of maize chloroplast splicing factor CRS1; Required for the splicing of group IIA introns in chloroplasts, by regulating the intron folding. Forms splicing particles with RNA. May also be involved in chloroplast protein translation (720 aa)
     
   
  0.836
AT4G37510
Ribonuclease III family protein; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (537 aa)
     
   
  0.797
AT5G04810
Pentatricopeptide (PPR) repeat-containing protein; May play a role in the plastid ribosome biogenesis (952 aa)
     
   
  0.773
CFM3A
CRM family member 3A; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3A and CAF1 or CAF2. Required for seed development. May influence the biogenesis of the mitochondrial small ribosomal subunit (881 aa)
     
   
  0.707
AT1G15920
Putative CCR4-associated factor 1-2; Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression (By similarity) (286 aa)
           
  0.670
CFM3B
CRM family member 3B; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3B and CAF1 or CAF2. Required for seed development (907 aa)
     
   
  0.661
WTF1
What’s this factor? (528 aa)
     
   
  0.660
HCF152
HIGH CHLOROPHYLL FLUORESCENCE 152; Involved in the processing of polycistronic chloroplast psbB-psbT-psbH-petB-petD transcript. Could bind RNA (778 aa)
     
   
  0.615
AT5G46420
RimM-like 16S rRNA processing protein (653 aa)
     
   
  0.608
PGR3
Proton gradient regulation 3; Plays a role in the stabilization of the primary polycistronic transcript of the petL operon encoding subunits of the cytochrome b6-f complex (1112 aa)
     
   
  0.598
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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