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AT1G24240 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G24240" - Ribosomal protein L19 family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G24240Ribosomal protein L19 family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, intracellular; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L19 (InterPro-IPR001857); BEST Arabidopsis thaliana protein match is- Ribosomal protein L19 family protein (TAIR-AT4G11630.1); Has 7931 Blast hits to 7931 proteins in 2663 species- Archae - 0; Bacteria - 5364; Metazoa - 103; Fungi - 54; Plants - 151; Viruses - 0; Other Eukaryote [...] (222 aa)    
Predicted Functional Partners:
AT5G53070
Ribosomal protein L9/RNase H1; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, intracellular; Expressed in 19 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L9 (InterPro-IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro-IPR009027), Ribosomal protein L9, N-terminal (InterPro-IPR020070), Ribosomal protein L9, C-terminal (InterPro-IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa [...] (221 aa)
     
 
  0.985
AT1G07830
Ribosomal protein L29 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in mitochondrion, ribosome, mitochondrial ribosome, intracellular; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L47, mitochondrial (InterPro-IPR010729), Ribosomal protein L29 (InterPro-IPR001854); Has 365 Blast hits to 365 proteins in 201 species- Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source- NCBI BLink) (144 aa)
     
 
  0.985
DECOY
At1g14620/T5E21_15; DECOY (DECOY); Contains the following InterPro domains- Ribosomal protein L46 (InterPro-IPR021757); Has 274 Blast hits to 274 proteins in 142 species- Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 120; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source- NCBI BLink) (233 aa)
     
      0.981
AT3G49080
Ribosomal protein S5 domain 2-like superfamily protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic small ribosomal subunit, ribosome, intracellular; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein S9 (InterPro-IPR000754), Ribosomal protein S5 domain 2-type fold (InterPro-IPR020568), Ribosomal protein S9, conserved site (InterPro-IPR020574), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro-IPR014721); BEST Arabidopsis thaliana pro [...] (430 aa)
   
 
  0.980
RPS9
Ribosomal protein S9, nuclear encoded component of the chloroplast ribosome (208 aa)
   
 
  0.980
AT1G16870
Mitochondrial 28S ribosomal protein S29-related; Contains the following InterPro domains- Ribosomal protein S23/S29, mitochondrial (InterPro-IPR019368); Has 239 Blast hits to 239 proteins in 116 species- Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 38; Plants - 38; Viruses - 0; Other Eukaryotes - 57 (source- NCBI BLink) (480 aa)
     
 
  0.978
AT3G59650
Mitochondrial ribosomal protein L51/S25/CI-B8 family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion; Expressed in 21 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Ribosomal protein/NADH dehydrogenase domain (InterPro-IPR007741) (146 aa)
     
 
  0.974
AT5G56940
30S ribosomal protein S16-2, chloroplastic/mitochondrial; Ribosomal protein S16 family protein; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in mitochondrion, ribosome, plastid; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein S16 (InterPro-IPR000307); BEST Arabidopsis thaliana protein match is- small subunit ribosomal protein 16 (TAIR-AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species- Archae - 0; Bacteria - 5438; Meta [...] (135 aa)
 
 
  0.972
SSR16
30S ribosomal protein S16-1, chloroplastic; Encodes ribosomal protein S16, has embryo-defective lethal mutant phenotype (113 aa)
 
 
  0.971
AT3G18760
Translation elongation factor EF1B/ribosomal protein S6 family protein; Its function is described as structural constituent of ribosome, rRNA binding; Involved in translation; Located in ribosome; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Translation elongation factor EF1B/ribosomal protein S6 (InterPro-IPR014717), Ribosomal protein S6 (InterPro-IPR000529); Has 47 Blast hits to 47 proteins in 22 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (139 aa)
     
 
  0.968
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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