STRINGSTRING
AT1G26090 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26090" - P-loop containing nucleoside triphosphate hydrolase-like protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26090P-loop containing nucleoside triphosphate hydrolase-like protein (455 aa)    
Predicted Functional Partners:
AT5G63220
Uncharacterized protein (324 aa)
       
 
  0.934
SYP31
Syntaxin-31; Vesicle trafficking protein that functions in the secretory pathway (336 aa)
       
      0.618
SYP32
Syntaxin-32; Vesicle trafficking protein that functions in the secretory pathway (361 aa)
       
      0.618
PBA1
Proteasome subunit beta type-6; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (234 aa)
     
      0.538
AT5G25040
Major facilitator protein; Could mediate folate transport (517 aa)
   
        0.532
PBC2
20S proteasome beta subunit C2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (204 aa)
       
      0.530
PBC1
Proteasome beta subunit C1; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (204 aa)
       
      0.530
AT5G42220
Ubiquitin family protein (879 aa)
       
 
  0.518
RAD23D
RADIATION SENSITIVE23D; May be involved in nucleotide excision repair (By similarity). Binds and presumably selects ubiquitin-conjugates for destruction. Prefers multiubiquitin chains rather than single ubiquitins, with a binding affinity for ’Lys-48’-linked ubiquitin chains. Acts as a ubiquitin receptor that associates with the 26S proteasomal docking subunit RPN10 for the indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP) (By similarity) (378 aa)
       
 
  0.518
UBQ9
Ubiquitin 9; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-11-linked is involved in ERAD (endoplasmic re [...] (322 aa)
       
 
  0.518
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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