STRINGSTRING
AT1G26540 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G26540" - Agenet domain-containing protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26540Agenet domain-containing protein (695 aa)    
Predicted Functional Partners:
SBT1.3
Subtilase 1.3 (780 aa)
     
        0.438
VDD
VERDANDI (307 aa)
     
        0.437
VAL3
VP1/ABI3-like 3; May be involved in plant development (713 aa)
     
        0.437
ABCG13
ATP-binding cassette G13 (678 aa)
     
        0.437
AT5G61120
Uncharacterized protein (426 aa)
     
        0.436
AT5G03060
Uncharacterized protein (292 aa)
     
        0.436
AT3G04960
Uncharacterized protein (605 aa)
     
        0.436
CR4
Crinkly4; Controls formative cell division in meristems, including root tips and lateral root initiation zones of the pericycle, in response to CLE40 signal. Acts with CLE40p peptide as a ligand- receptor pair in a signal transduction pathway, coordinating movement of the root tip and organization of cell divisions in the root meristem. Required during embryogenesis and development, probably for the differentiation of protoderm and epidermal cells. Involved in the regulation of cellular organization during the development of sepal margins and ovule integument outgrowth. Can phosphoryla [...] (895 aa)
     
        0.435
chr31
Chromatin remodeling 31; Probable chromatin remodeling factor (1410 aa)
     
        0.435
ERL1
ERECTA-like 1; Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2. Redundantly involved with ER in procambial development regulation. Forms a functional ligand-receptor pair with EPF1 (AC Q8S8I4) (PubMed-22241782) (966 aa)
     
        0.433
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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