STRINGSTRING
AT1G28150 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G28150" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28150Uncharacterized protein (123 aa)    
Predicted Functional Partners:
AT4G13200
Uncharacterized protein (185 aa)
   
   
  0.807
AT4G01150
Uncharacterized protein; Determines thylakoid architecture by inducing membrane curvature (164 aa)
   
   
  0.710
BGLU41
Beta glucosidase 41 (535 aa)
           
  0.670
AT5G52490
Fibrillarin family protein; S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins. Involved in pre-rRNA processing. Utilizes the methyl donor S-adenosyl-L- methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in pre-ribosomal RNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. Also acts as a protein methyltransferase by mediating methylation of ’Gln-105’ of hi [...] (292 aa)
           
  0.670
AT3G10130
Heme-binding-like protein (309 aa)
           
  0.670
AT1G32220
NAD(P)-binding Rossmann-fold-containing protein (296 aa)
           
  0.670
FIB4
Fibrillin 4; Required for plastoglobule development and resistance to multiple stresses. Regulates plastoglobule osmiophilic content. May be involved in the transport of lipophilic antioxidants in and out of the plastoglobule (284 aa)
   
     
  0.659
AT5G05200
Protein kinase superfamily protein (540 aa)
           
  0.637
AT1G78140
S-adenosyl-L-methionine-dependent methyltransferase-like protein (355 aa)
           
  0.637
AT1G71810
aarF domain-containing kinase (692 aa)
           
  0.637
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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