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AT1G29500 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29500" - SAUR-like auxin-responsive protein family in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G29500SAUR-like auxin-responsive protein family; May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals (135 aa)    
Predicted Functional Partners:
SAUR23
SAUR-like auxin-responsive protein family; Functions as positive effectors of cell expansion through modulation of auxin transport (90 aa)
     
   
  0.901
AT1G29430
SAUR-like auxin-responsive protein family; May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals; Belongs to the ARG7 family (141 aa)
     
   
0.866
SAUR68
SAUR-like auxin-responsive protein family; May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals (143 aa)
     
   
0.865
SAUR63
SAUR-like auxin-responsive protein family; May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals; Belongs to the ARG7 family (141 aa)
     
   
0.843
AT1G29450
SAUR-like auxin-responsive protein family; May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals (141 aa)
     
   
0.830
AT1G29460
SAUR-like auxin-responsive protein family; May promote auxin-stimulated organ elongation, such as hypocotyls, stamen filaments and petals (148 aa)
     
   
0.827
SAUR15
SAUR-like auxin-responsive protein family; mRNA is rapidly induced by auxin and is very short-lived. Has been used as a reporter gene in studying auxin mutants (89 aa)
     
   
  0.793
AT4G24700
Uncharacterized protein F22K18.100; Unknown protein; Has 20 Blast hits to 20 proteins in 7 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (143 aa)
     
   
  0.774
MEE9
Uncharacterized protein F23C21.1; Maternal effect embryo arrest 9 (MEE9); Its function is described as molecular_function unknown; Involved in embryo development ending in seed dormancy, pollen development; Located in plasma membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Has 165 Blast hits to 92 proteins in 39 species- Archae - 0; Bacteria - 18; Metazoa - 11; Fungi - 18; Plants - 26; Viruses - 81; Other Eukaryotes - 11 (source- NCBI BLink) (147 aa)
     
   
  0.774
TBL12
Plant protein of unknown function (DUF828); Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication); Belongs to the PC-esterase family. TBL subfamily (407 aa)
           
  0.769
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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