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AT1G29710 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G29710" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29710Pentatricopeptide repeat-containing protein (475 aa)    
Predicted Functional Partners:
EMB3123
EMBRYO DEFECTIVE 3123 (222 aa)
           
  0.865
MORF1
Uncharacterized protein; Involved in organellar RNA editing. Required for the processing of numerous RNA editing sites in mitochondria (PubMed-22411807, PubMed-23818871). Binds to the mitochondrial MEF19 and MEF21 factors, two pentatricopeptide repeat-containing proteins involved in RNA editing (PubMed-22411807) (419 aa)
           
  0.810
MEF14
Mitochondrial editing factor 14 (399 aa)
           
  0.734
LSP1
Translation initiation factor 4E-2; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (198 aa)
           
  0.504
SURF1
SURFEIT 1; Probably involved in the biogenesis of the COX complex (354 aa)
     
   
  0.449
AT1G48510
Surfeit locus 1 cytochrome c oxidase biogenesis protein; May be involved in the biogenesis of the COX complex (384 aa)
     
   
  0.449
NAD6
NADH dehydrogenase 6; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity) (205 aa)
           
  0.448
AT1G02410
Cytochrome c oxidase assembly protein CtaG / Cox11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (287 aa)
       
 
  0.433
COX15
Cytochrome c oxidase 15; May be involved in the biosynthesis of heme A (457 aa)
     
   
  0.404
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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