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nMAT1 protein (Arabidopsis thaliana) - STRING interaction network
"nMAT1" - Nuclear maturase 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nMAT1Nuclear maturase 1 (711 aa)    
Predicted Functional Partners:
AT1G74350
Intron maturase, type II-like protein (753 aa)
     
   
  0.903
AT4G31010
CRS2-associated factor 1; May be involved for the splicing of group IIB introns in mitochondrions (405 aa)
     
   
  0.866
WTF9
What’s this factor 9 (387 aa)
           
  0.856
AT1G06710
Pentatricopeptide repeat-containing protein (997 aa)
     
   
  0.848
AT2G02510
NADH dehydrogenase (ubiquinone); Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity) (72 aa)
           
  0.807
BIR6
Buthionine sulfoximine-insensitive roots 6 (621 aa)
     
   
  0.766
MATR
Intron maturase, type II family protein (672 aa)
           
  0.738
OTP43
Organelle transcript processing defect 43 (453 aa)
           
  0.738
AT4G32430
Pentatricopeptide repeat-containing protein (763 aa)
     
   
  0.717
ABO5
ABA Overly-Sensitive 5 (650 aa)
     
   
  0.711
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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