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AT1G30660 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G30660" - Nucleic acid binding protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30660Nucleic acid binding protein; May act as a DNA primase (337 aa)    
Predicted Functional Partners:
POLGAMMA2
Polymerase gamma 2; In addition to polymerase activity, this DNA polymerase 5’ to 3’ exonuclease activity (By similarity). Required for DNA replication and accumulation in plastids and mitochondria. May be required for DNA repair in both organelles (1050 aa)
           
  0.863
POLGAMMA1
Polymerase gamma 1; In addition to polymerase activity, this DNA polymerase 5’ to 3’ exonuclease activity (By similarity). Required for DNA replication and accumulation in plastids and mitochondria (1049 aa)
           
  0.841
TUB4
Beta tubulin gene; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (444 aa)
           
  0.604
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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