STRINGSTRING
NFD4 protein (Arabidopsis thaliana) - STRING interaction network
"NFD4" - NUCLEAR FUSION DEFECTIVE 4 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFD4NUCLEAR FUSION DEFECTIVE 4; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed-16698901) (582 aa)    
Predicted Functional Partners:
NFD2
NUCLEAR FUSION DEFECTIVE 2; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (191 aa)
           
  0.910
NFD3
NUCLEAR FUSION DEFECTIVE 3; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (314 aa)
           
  0.865
EDA41
Embryo sac development arrest 41 (369 aa)
           
  0.863
NFD6
NUCLEAR FUSION DEFECTIVE 6; Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (100 aa)
           
  0.854
HMGB6
High-mobility group box 6; Binds preferentially double-stranded supercoiled DNA (PubMed-14756567). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed-16698901) (241 aa)
           
  0.805
EDA35
Embryo sac development arrest 35; Required for S phase entry of the cell cycle (333 aa)
           
  0.773
RPL21C
50S ribosomal protein L21; This protein binds to 23S ribosomal RNA in the presence of protein L20 (220 aa)
           
  0.739
EDA24
Embryo sac development arrest 24 (167 aa)
           
  0.738
AT5G23405
HMG-box (high mobility group) DNA-binding protein (149 aa)
           
  0.731
AT1G76110
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (PubMed-19053246). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed-16698901) (338 aa)
           
  0.731
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]