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STRS1 protein (Arabidopsis thaliana) - STRING interaction network
"STRS1" - STRESS RESPONSE SUPPRESSOR 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
STRS1STRESS RESPONSE SUPPRESSOR 1; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (537 aa)    
Predicted Functional Partners:
AT5G14520
Pescadillo-related protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (590 aa)
     
 
  0.994
AT4G25730
FtsJ-like methyltransferase family protein; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (821 aa)
     
 
  0.981
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
   
 
  0.978
AT1G13160
ARM repeat superfamily protein (804 aa)
     
        0.977
AT3G23620
Ribosome production factor 2-like protein (314 aa)
     
 
  0.968
AT1G79150
Binding (830 aa)
     
      0.962
AT1G50920
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (671 aa)
     
 
  0.962
AT4G16630
DEAD-box ATP-dependent RNA helicase 28 (789 aa)
   
 
0.961
AT2G40360
transducin/WD-40 repeat-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (753 aa)
     
 
  0.956
AT4G34910
DEAD-box ATP-dependent RNA helicase 16 (626 aa)
   
 
0.955
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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