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HDG10 protein (Arabidopsis thaliana) - STRING interaction network
"HDG10" - Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HDG10Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family (708 aa)    
Predicted Functional Partners:
AT1G70780
Uncharacterized protein F5A18.4; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion; Expressed in sperm cell, male gametophyte, pollen tube; Expressed during L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (140 aa)
           
  0.837
AT2G36560
AT hook motif DNA-binding family protein; Contains the following InterPro domains- Protein of unknown function DUF296 (InterPro-IPR005175); BEST Arabidopsis thaliana protein match is- AT-hook motif nuclear-localized protein 1 (TAIR-AT4G12080.1); Has 3707 Blast hits to 1497 proteins in 203 species- Archae - 2; Bacteria - 99; Metazoa - 609; Fungi - 221; Plants - 729; Viruses - 1; Other Eukaryotes - 2046 (source- NCBI BLink) (574 aa)
           
  0.811
AT1G60400
F-box/RNI-like superfamily protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), Leucine-rich repeat 2 (InterPro-IPR013101); BEST Arabidopsis thaliana protein match is- F-box family protein (TAIR-AT1G60410.1); Has 2069 Blast hits to 2030 proteins in 25 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2069; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (403 aa)
           
  0.811
AT5G52150
RING/U-box superfamily protein; Its function is described as zinc ion binding; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841), Zinc finger, C3HC4 RING-type (InterPro-IPR018957); BEST Arabidopsis thaliana protein match is- RING/U-box superfamily protein (TAIR-AT5G52140.1); Has 5320 Blast hits to 5310 proteins in 208 species- Archae - 0; Bacteria - 0; Metazoa - 1777; Fungi - 300; Plants - 2669; Viruses - 0; Other Eukaryotes - 574 (source- NCBI BLink) (200 aa)
           
  0.740
AT3G03305
Calcineurin-like metallo-phosphoesterase superfamily protein; Its function is described as hydrolase activity, protein serine/threonine phosphatase activity; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Metallophosphoesterase (InterPro-IPR004843); Has 171 Blast hits to 169 proteins in 60 species- Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 10; Plants - 59; Viruses - 0; Other Eukaryotes - 34 (source- NCBI BLink) (743 aa)
           
  0.740
AT1G34750
Protein phosphatase 2C family protein; Its function is described as protein serine/threonine phosphatase activity, catalytic activity; Involved in biological_process unknown; Located in plasma membrane; Expressed in 25 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein phosphatase 2C-related (InterPro-IPR001932), Protein phosphatase 2C (InterPro-IPR015655), Protein phosphatase 2C, N-terminal (InterPro-IPR014045); BEST Arabidopsis thaliana protein match is- phytochrome-associated protein phosphatase type 2C (TAIR-AT1G22280.1); Has 7616 [...] (282 aa)
           
  0.740
SUVH7
Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7; Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain (693 aa)
           
  0.711
AT2G32380
Transmembrane protein 97, predicted; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Transmembrane protein 97, predicted (InterPro-IPR016964); BEST Arabidopsis thaliana protein match is- Transmembrane protein 97, predicted (TAIR-AT1G05210.1); Has 585 Blast hits to 585 proteins in 19 species- Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 26 (source- [...] (168 aa)
           
  0.695
AT3G49770
Unknown protein; Has 6 Blast hits to 6 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (190 aa)
           
  0.690
AT1G11810
F-box associated ubiquitination effector family protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), F-box associated domain, type 1 (InterPro-IPR006527), F-box associated interaction domain (InterPro-IPR017451); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT3G13830.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2 [...] (377 aa)
           
  0.690
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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