STRINGSTRING
LCV2 protein (Arabidopsis thaliana) - STRING interaction network
"LCV2" - Like COV 2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCV2Like COV 2 (261 aa)    
Predicted Functional Partners:
AT2G20150
Uncharacterized protein (90 aa)
           
  0.955
AT2G20110
Tesmin/TSO1-like CXC domain-containing protein; Plays a role in development of both male and female reproductive tissues (578 aa)
           
  0.867
LCR60
Defensin-like protein 172 (84 aa)
           
  0.864
P4H13
Prolyl 4-hydroxylase 13; Catalyzes the post-translational formation of 4- hydroxyproline in -Xaa-Pro-Gly- sequences in proline-rich peptide sequences of plant glycoproteins and other proteins. Hydroxyprolines are important constituent of many plant cell wall glycoproteins such as extensins, hydroxyproline-rich glycoproteins, lectins and arabinogalactan proteins. Possesses high affinity for leucine-rich repeat and proline-rich extensins of root cell walls that are essential for root hair development. Hydroxyprolines define the subsequent O-glycosylation sites by arabinosyltransferases w [...] (274 aa)
           
  0.740
RPT2b
Regulatory particle AAA-ATPase 2b; The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (443 aa)
           
  0.680
MEO
MEIDOS; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity). Probably implicated in incompatibility response after hybridization (150 aa)
           
  0.634
At3g47390
PHOTOSENSITIVE 1; Pyrimidine reductase involved in the riboflavin biosynthesis pathway. Has also a non-functional N-terminal deaminase domain that lacks the catalytically essential zinc- binding residues (599 aa)
              0.495
KOB1
KOBITO; Involved in the coordination between cell elongation and cellulose synthesis by promoting the expression of genes involved in cell elongation and cellulose synthesis (PubMed-15010620, PubMed-10859181, PubMed-12215501, PubMed-24995569). Acts as a regulator of plasmodesmatal permeability (PubMed-22457425). Mediates abscisic acid (ABA) and sugar responses essential for growth (e.g. seed germination, stomatal regulation and ABA- regulated gene expression) (PubMed-14742875). Required for normal organogenesis by promoting cell elongation, regulating cell differentiation in vascular t [...] (533 aa)
           
  0.473
AT5G66470
GTP-binding protein Era (427 aa)
              0.454
AT5G52790
CBS domain-containing protein with a domain of unknown function (DUF21) (500 aa)
              0.454
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]