STRINGSTRING
NPSN12 protein (Arabidopsis thaliana) - STRING interaction network
"NPSN12" - Novel plant SNARE 12 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPSN12Novel plant SNARE 12; Vesicle trafficking protein that functions in the secretory pathway (265 aa)    
Predicted Functional Partners:
VTI13
Vesicle transport V-snare 13; May function as a v-SNARE responsible for targeting vesicles involved in the secretory pathway (195 aa)
         
  0.812
VAMP721
Vesicle-associated membrane protein 721; Involved in the targeting and/or fusion of transport vesicles to their target membrane (219 aa)
     
 
  0.799
VAMP726
Vesicle-associated membrane protein 72; Involved in the targeting and/or fusion of transport vesicles to their target membrane (220 aa)
     
 
  0.782
VTI1B
Vesicle transport v-SNARE 12; May function as a v-SNARE responsible for the docking or fusion of transport vesicles within the trans-Golgi network (TGN). May be also involved in retrograde traffic to the cis-Golgi (By similarity) (222 aa)
         
  0.756
SYP61
Syntaxin-61; Vesicle trafficking protein that functions in the secretory pathway. Involved in osmotic stress tolerance and in abscisic acid (ABA) regulation of stomatal responses (245 aa)
         
  0.748
SYP111
Syntaxin of plants 111; Involved in cytokinesis. Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division (310 aa)
       
  0.737
SYP32
Syntaxin-32; Vesicle trafficking protein that functions in the secretory pathway (361 aa)
     
 
  0.735
MEMB11
Membrin 11; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (225 aa)
         
  0.733
VAMP725
Vesicle-associated membrane protein 725; Involved in the targeting and/or fusion of transport vesicles to their target membrane (285 aa)
     
 
  0.730
MEMB12
Membrin 12; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (219 aa)
         
  0.724
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (7%) [HD]