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STRINGSTRING
NPSN12 protein (Arabidopsis thaliana) - STRING interaction network
"NPSN12" - Novel plant SNARE 12 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
NPSN12Novel plant SNARE 12; Vesicle trafficking protein that functions in the secretory pathway (265 aa)    
Predicted Functional Partners:
SYP32
Syntaxin of plants 32; Vesicle trafficking protein that functions in the secretory pathway; Belongs to the syntaxin family (361 aa)
         
  0.920
MEMB12
Membrin-12; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (219 aa)
         
  0.899
VAMP711
Vesicle-associated membrane protein 711; AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups- Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a t [...] (219 aa)
         
  0.874
MEMB11
Membrin-11; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (225 aa)
         
  0.843
SYP73
Syntaxin of plants 73; Vesicle trafficking protein that functions in the secretory pathway (264 aa)
     
 
  0.837
SYP72
Syntaxin of plants 72; Vesicle trafficking protein that functions in the secretory pathway; Belongs to the syntaxin family (267 aa)
     
 
  0.826
SNAP29
Synaptosomal-associated protein SNAP25-like 29; SNAREs, soluble N-ethylmaleimide-sensitive factor- attachment protein receptors, are essential proteins for fusion of cellular membranes. SNAREs localized on opposing membranes assemble to form a trans-SNARE complex, an extended, parallel four alpha-helical bundle that drives membrane fusion (251 aa)
           
  0.818
SYP111
Syntaxin-related protein KNOLLE; Involved in cytokinesis. Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division (310 aa)
         
  0.792
VAMP726
Putative vesicle-associated membrane protein 726; Involved in the targeting and/or fusion of transport vesicles to their target membrane (220 aa)
         
  0.787
VAP27-1
Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2 (256 aa)
     
 
  0.786
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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