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AT1G49715 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G49715" - Defensin-like protein 175 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G49715Defensin-like protein 175 (87 aa)    
Predicted Functional Partners:
AT5G15220
Large subunit ribosomal protein L27 (154 aa)
           
  0.987
AT5G01080
Beta-galactosidase related protein (184 aa)
           
  0.987
AT3G10845
RNA recognition motif-containing protein (423 aa)
           
  0.987
AT2G34290
Protein kinase family protein (265 aa)
           
  0.987
AT1G23810
Amphipathic helix repeat-containing protein (241 aa)
           
  0.987
AT4G29033
Putative defensin-like protein 31 (81 aa)
           
  0.960
PDF1.3
Plant defensin 1.3; Confers broad-spectrum resistance to pathogens. Has antifungal activity in vitro (80 aa)
           
  0.670
LCR19
Defensin-like protein 183 (126 aa)
     
        0.438
AT2G22155
Uncharacterized protein (101 aa)
     
        0.438
AT1G56553
Defensin-like protein 199 (84 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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