STRINGSTRING
AT2G28370 protein (Arabidopsis thaliana) - STRING interaction network
"AT2G28370" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT2G28370Uncharacterized protein (179 aa)    
Predicted Functional Partners:
AT1G50575
Putative lysine decarboxylase (306 aa)
           
  0.987
HAT14
Homeobox-leucine zipper protein; Probable transcription factor (336 aa)
           
  0.829
RBP31
Ribonucleoprotein; Required for specific RNA editing events in chloroplasts and stabilizes specific chloroplast mRNAs. Associates with the 3’- terminus ndhF mRNAs and protects them against 3’-exonucleolytic degradation (PubMed-19297624, PubMed-23110894). Required for normal chloroplast development under cold stress conditions by stabilizing transcripts of numerous mRNAs under these conditions (PubMed-23110894). May modulate telomere replication through RNA binding domains (PubMed-14703514) (329 aa)
           
  0.491
AT1G36980
Uncharacterized protein (135 aa)
     
        0.454
AT1G51200
A20/AN1-like zinc finger family protein; May be involved in environmental stress response (173 aa)
     
        0.445
RCI2
G-box regulating factor 6; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes (By similarity). Specific negative regulator of slow-vacuolar (SV) ion channel. Mediates F-actin dynamics possibly through inhibiting ADF1 phosphorylation (PubMed-26345162) (273 aa)
     
        0.422
POL
Poltergeist; Involved in the regulation of pedicel length and of CLAVATA pathways controlling stem cell identity at shoot and flower meristems (856 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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