STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTR5UDP-galactose/UDP-glucose transporter 5; Sugar transporter involved in the transport of nucleotide- sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum. (347 aa)    
Predicted Functional Partners:
PNSB2
Photosynthetic NDH subunit of subcomplex B 2, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
      
 0.712
GONST1
GDP-mannose transporter GONST1; Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components. Is required for the correct mannosylation of the glycosylinositol phosphoceramides (GIPC). Can indifferently transport GDP-mannose, GDP-Glucose, GDP-Fucose or GDP-Galactose in vitro. Belongs to the nucleotide-sugar transporter family. GDP- Mannose:GMP antiporter (GMA) (TC 2.A.7.13) subfamily.
   
  
 0.646
NAT4
Nucleobase-ascorbate transporter 4; Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily.
     
 0.582
STP7
Sugar transport protein 7; Mediates an active uptake of hexoses, probably by sugar/hydrogen symport; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.576
SNE
F-box protein SNE; Essential component of a SCF-type E3 ligase complex that positively regulates the gibberellin signaling pathway. Upon gibberellin treatment, such complex probably mediates the ubiquitination and subsequent degradation of DELLA proteins (GAI, RGA and RGL2), some repressors of the gibberellin pathway, leading to activate the pathway. Can partially complement the absence of GID2/SLY1.
      
 0.499
RPL15B
60S ribosomal protein L15-2; Belongs to the eukaryotic ribosomal protein eL15 family.
 
      0.481
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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