STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRK23Encodes a cysteine-rich receptor-like protein kinase (830 aa)    
Predicted Functional Partners:
AT3G29000
Calcium-binding EF-hand family protein; Potential calcium sensor
   
 
 0.658
CaMK1
CDPK-related kinase 5; May play a role in signal transduction pathways that involve calcium as a second messenger
    
 
 0.647
AT3G47480
Calcium-binding EF-hand family protein; Potential calcium sensor
   
 
 0.622
AT1G21550
Calcium-binding EF-hand family protein; Potential calcium sensor
   
 
 0.606
AT5G39670
Calcium-binding EF-hand family protein; Potential calcium sensor
   
 
 0.605
AT3G01830
Calcium-binding EF-hand family protein; Potential calcium sensor
   
 
 0.593
CML11
Encodes a calmodulin-like protein
   
 
 0.573
CML30
Calcium-binding EF-hand family protein; Potential calcium sensor
    
 
 0.546
CML37
Calcium-binding protein CML37; Potential calcium sensor that binds calcium in vitro
   
 
 0.502
ARD3
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
   
  
 0.469
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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