STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T21F11.13Envelope glycoprotein B. (538 aa)    
Predicted Functional Partners:
GILT
Gamma-interferon-responsive lysosomal thiol protein; Lysosomal thiol reductase that can reduce protein disulfide bonds. May facilitate the complete unfolding of proteins destined for lysosomal degradation; Belongs to the GILT family.
   
  
 0.743
F1N21.15
Proteasome maturation factor UMP1.
      
 0.719
PUX3
Plant UBX domain-containing protein 3.
      
 0.634
HMGB11
Putative high mobility group B protein 11; Binds preferentially DNA with A/T-rich content.
    
 
 0.619
HMGB10
High mobility group B protein 10; Binds preferentially DNA with A/T-rich content.
    
 
 0.619
HMGB15
High mobility group B protein 15; Binds preferentially DNA with A/T-rich content. Belongs to the HMGB family.
    
 
 0.619
HMGB9
High mobility group B protein 9; Binds preferentially DNA with A/T-rich content. Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus.
    
 
 0.619
SPP3A
Probable sucrose-phosphatase 3a; Catalyzes the final step of sucrose synthesis.
      
 0.545
MNC17.5
BTB/POZ domain-containing protein; Belongs to the SKP1 family.
      
 0.491
UFD1
Ubiquitin fusion degradation 1.
      
 0.473
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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