STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAL8Jacalin-related lectin 8; Belongs to the jacalin lectin family. (313 aa)    
Predicted Functional Partners:
JAL9
Jacalin-related lectin 9; Belongs to the jacalin lectin family.
   
  
0.902
PME46
Probable pectinesterase/pectinesterase inhibitor 46; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family.
   
  
 0.814
JAL10
Jacalin-related lectin 10; Belongs to the jacalin lectin family.
   
  
0.801
F24J8.4
2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). Required during sugar starvation.
      
 0.792
SCP2
Sterol carrier protein 2; Enhances the transfer of lipids between membranes in vitro. Active on phosphatidylcholine (PC), 1-palmitoyl 2- oleoyl phosphatidylcholine (POPC) and ergosterol, and, to a lower extent, dimyristoyl phosphatidic acid, stigmasterol, desmosterol, beta- sitosterol and steryl glucoside. Inactive or poorly active on palmitic acid, stearoyl-coenzyme A, cholesterol, glucosylceramide and ceramide. Required during seeds and seedlings development.
      
 0.790
Q56YK7_ARATH
Transmembrane protein.
      
 0.739
T27F4.5
Putative F-box/FBD/LRR-repeat protein At1g66300.
      
 0.739
B3H5U4_ARATH
Uncharacterized protein.
      
 0.718
F28D6.6
Mannose-P-dolichol utilization defect 1 protein homolog 2; Required for normal utilization of mannose-dolichol phosphate (Dol-P-Man) in the synthesis of N-linked and O-linked oligosaccharides and GPI anchors; Belongs to the MPDU1 (TC 2.A.43.3) family.
      
 0.717
TGG4
Myrosinase 4; Hydrolyzes sinigrin and, with lower efficiency, p-nitrophenyl beta-D-glucoside.
   
    0.702
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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