STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL46AGAMOUS-like 46. (329 aa)    
Predicted Functional Partners:
MDH9.23
Uncharacterized protein At5g42530; MDH9.23.
      
 0.852
F4IK72_ARATH
Protein rolling protein.
      
 0.803
T17A5.17
At2g17710/T17A5.17.
      
 0.803
F7N22.1
MADS-box family protein.
      
 0.790
GDPDL5
Glycerophosphodiester phosphodiesterase GDPDL5.
      
 0.785
F23H11.24
MADS-box family protein.
   
  
 0.784
F23H11.23
MADS-box family protein.
      
 0.784
F15D2.21
GDSL esterase/lipase At1g29660; Involved in EDS1-dependent systemic acquired resistance, maybe in phloem-mediated long-distance signaling. Belongs to the 'GDSL' lipolytic enzyme family.
      
 0.783
TULP3
Tubby-like F-box protein 3; Involved in abiotic stress signaling. Tethered to plasma membrane (PM) and probably bound to phosphatidylinositol 4,5- bisphosphate. Abiotic stresses (drought, salt, H(2)O(2)) trigger phospholipase C mediated PM dislogement and plastidial and nucleocytosolic relocation of TULP3; Belongs to the TUB family.
      
 0.740
MMI9.4
Similarity to embryo-specific protein 3.
      
 0.718
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.