Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CLPD | CLPF | P42762 | Q67Y99 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | 0.880 |
| CLPD | CLPP3 | P42762 | Q9SXJ6 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). In the absence of CLPP3, modified ClpPR core(s) could be formed, albeit at strongly reduced levels ; Belongs to the peptidase S14 family. | 0.963 |
| CLPD | CLPP5 | P42762 | Q9S834 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Belongs to the peptidase S14 family. | 0.884 |
| CLPD | CLPP6 | P42762 | Q9SAA2 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Essential protein required for chloroplast development and integrity. | 0.874 |
| CLPD | CLPR1 | P42762 | Q9XJ35 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic; Required for chloroplast development and differentiation. | 0.942 |
| CLPD | CLPR3 | P42762 | Q8L770 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic; Belongs to the peptidase S14 family. | 0.868 |
| CLPD | CLPT1 | P42762 | Q93WL3 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic; Accessory protein regulating the assembly of the plastidial Clp protease system. CLPT1 first binds to the heptameric P-ring containing the CLP3-6 subunits followed by CLPT2, and only then does the P-ring combine with the R-ring composed of the clpP1 and CLPR1-4 subunits. Once the core complex is fully assembled, it then associates to the CLPC chaperone partner to form the functional protease. CLPT1 and CLPT2 are partially redundant. | 0.923 |
| CLPD | CPLS1 | P42762 | Q9SX29 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | ATP-dependent Clp protease adapter protein CLPS1, chloroplastic; Small adapter protein that modulate the activity of CLPC (By similarity). Involved in plastid biogenesis in particular when chloroplast protein synthesis capacity is a limiting factor. Probably involved in substrate selection for plastid Clp protease system. Recruitment to ClpC chaperones is facilitated by CLPF thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | 0.944 |
| CLPD | ZHD11 | P42762 | Q9SEZ1 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | Zinc-finger homeodomain protein 11; Transcription factor involved in the up-regulation of several stress-inducible genes. Acts as a transcriptional activator by interacting with MED25 and NAC proteins. Involved in increased drought tolerance. | 0.881 |
| CLPD | clpP1 | P42762 | P56772 | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | Chloroplastic ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.928 |
| CLPF | CLPD | Q67Y99 | P42762 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | 0.880 |
| CLPF | CLPP3 | Q67Y99 | Q9SXJ6 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). In the absence of CLPP3, modified ClpPR core(s) could be formed, albeit at strongly reduced levels ; Belongs to the peptidase S14 family. | 0.970 |
| CLPF | CLPP5 | Q67Y99 | Q9S834 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Belongs to the peptidase S14 family. | 0.944 |
| CLPF | CLPP6 | Q67Y99 | Q9SAA2 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease proteolytic subunit 6, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Essential protein required for chloroplast development and integrity. | 0.914 |
| CLPF | CLPR1 | Q67Y99 | Q9XJ35 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic; Required for chloroplast development and differentiation. | 0.973 |
| CLPF | CLPR3 | Q67Y99 | Q8L770 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic; Belongs to the peptidase S14 family. | 0.909 |
| CLPF | CLPT1 | Q67Y99 | Q93WL3 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic; Accessory protein regulating the assembly of the plastidial Clp protease system. CLPT1 first binds to the heptameric P-ring containing the CLP3-6 subunits followed by CLPT2, and only then does the P-ring combine with the R-ring composed of the clpP1 and CLPR1-4 subunits. Once the core complex is fully assembled, it then associates to the CLPC chaperone partner to form the functional protease. CLPT1 and CLPT2 are partially redundant. | 0.930 |
| CLPF | CPLS1 | Q67Y99 | Q9SX29 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | ATP-dependent Clp protease adapter protein CLPS1, chloroplastic; Small adapter protein that modulate the activity of CLPC (By similarity). Involved in plastid biogenesis in particular when chloroplast protein synthesis capacity is a limiting factor. Probably involved in substrate selection for plastid Clp protease system. Recruitment to ClpC chaperones is facilitated by CLPF thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | 0.903 |
| CLPF | clpP1 | Q67Y99 | P56772 | Clp protease adapter protein ClpF, chloroplastic; Clp protease adapter that facilitates CLPS1 recruitment to ClpC chaperones thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC). | Chloroplastic ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.902 |
| CLPP3 | CLPD | Q9SXJ6 | P42762 | ATP-dependent Clp protease proteolytic subunit 3, chloroplastic; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). In the absence of CLPP3, modified ClpPR core(s) could be formed, albeit at strongly reduced levels ; Belongs to the peptidase S14 family. | Chaperone protein ClpD, chloroplastic; Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. The ATPase activity of CLPD is stimulated by CLPT1. Has no ADPase activity. Interacts with transit peptides with a positional preference. Localization of the signal sequence at the N-terminal end of a protein seems mandatory for interaction to take place ; Belongs to the ClpA/ClpB family. ClpD subfamily. | 0.963 |
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