STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPP1A60S acidic ribosomal protein P1-1; Plays an important role in the elongation step of protein synthesis. (112 aa)    
Predicted Functional Partners:
RPP0C
60S acidic ribosomal protein P0-3; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family.
  
 0.998
RPL32A
60S ribosomal protein L32-1; Belongs to the eukaryotic ribosomal protein eL32 family.
   
 0.997
RPL26A
60S ribosomal protein L26-1; Belongs to the universal ribosomal protein uL24 family.
   
 0.997
RPP0B
60S acidic ribosomal protein P0-2; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.997
RPL7AB
60S ribosomal protein L7a-2; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.997
RPL30C
60S ribosomal protein L30-3; Belongs to the eukaryotic ribosomal protein eL30 family.
   
 0.995
RPL9D
60S ribosomal protein L9-2; Belongs to the universal ribosomal protein uL6 family.
   
 0.995
RPL29A
60S ribosomal protein L29-1; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.994
RPP0A
60S acidic ribosomal protein P0-1; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family.
  
 0.993
RPP3A
60S acidic ribosomal protein P3-1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.993
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.