STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F22G5.3Pentatricopeptide repeat-containing protein At1g07590, mitochondrial. (534 aa)    
Predicted Functional Partners:
T13K14.80
Double-stranded RNA-binding domain (DsRBD)-containing protein.
      
 0.795
F23M19.10
Regulator of Vps4 activity in the MVB pathway protein.
      
 0.785
BHLH145
Transcription factor bHLH145.
   
  
 0.773
MT1A
Metallothionein-like protein 1A; Metallothioneins have a high content of cysteine residues that bind various heavy metals (Probable). Functions as metal chelator of copper (Cu) and zinc (Zn). Plays a role in Cu homeostasis in the roots under elevated Cu concentration. Functions cooperatively with the phytochelatin synthase PCS1 to protect plants from Cu and cadmium (Cd) toxicity. Plays a role in Cu homeostasis, specifically in the remobilization of Cu from senescing leaves. The mobilization of Cu from internal sources is important for seed development. Confers tolerance to Cd and plays [...]
   
  
 0.757
F15D2.6
Uncharacterized protein F15D2.6.
      
 0.719
FLA20
Putative fasciclin-like arabinogalactan protein 20; May be a cell surface adhesion protein; Belongs to the fasciclin-like AGP family.
      
 0.695
FLA19
Fasciclin-like arabinogalactan protein 19; May be a cell surface adhesion protein; Belongs to the fasciclin-like AGP family.
      
 0.655
FGT1
Protein FORGETTER 1; Required for normal embryo development. Necessary to acquire heat stress (HS) memory, by modulating nucleosome occupancy and regulating heat-induced gene expression. Associates globally with the nucleosome-poor regions flanking the transcription units of expressed genes. Binds to the promoter regions, primarily to the proximal promoter just upstream of the transcriptional start sites (TSS) and somewhat more weakly to the region downstream of the transcription termination site (TTS), of actively expressed genes (e.g. HSA32, HSP18.2 and HSP22.0) in a heat- dependent [...]
      
 0.635
F3I6.15
Paired amphipathic helix repeat-containing protein.
     
 0.587
LRR-RLK-2
Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840.
   
  
 0.583
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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