STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GILPGSH-induced LITAF domain protein; Acts as a membrane anchor, bringing other regulators of programmed cell death (PCD) to the plasma membrane. Negatively regulates hypersensitive cell death; Belongs to the CDIP1/LITAF family. (134 aa)    
Predicted Functional Partners:
LSD1
Protein LSD1; Negative regulator of reactive oxygen-induced cell death, cold stress-induced cell death, pathogen-induced hypersensitive response (HR), basal disease resistance. May be involved in the induction of the copper/zinc superoxide dismutase CSD1 and CSD2 that detoxify accumulating superoxide before the reactive oxygen species (ROS) can trigger a cell death cascade. LSD1 and LOL1 have antagonistic effects on CSD1 and CSD2 accumulation to regulate oxidative stress- induced cell death. Antagonizes the function of BZIP10, a positive regulator of cell death, by interacting in the c [...]
   
 
 0.844
FAX5
Protein FATTY ACID EXPORT 5; May be involved in free fatty acids export.
   
  
 0.821
CML16
Probable calcium-binding protein CML16; Potential calcium sensor.
   
  
 0.803
MTI20.17
Ribosomal RNA small subunit methyltransferase G.
   
  
 0.800
Q8L9W9_ARATH
At4g27652.
   
  
 0.786
MSF3.7
Transmembrane protein.
   
  
 0.780
AP22.22
Probable LRR receptor-like serine/threonine-protein kinase At4g37250; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.776
MKD15.20
Similarity to glucose regulated repressor protein.
      
 0.776
Q3E9V5_ARATH
Transmembrane protein.
   
  
 0.760
F15E12.12
Hikeshi-like protein.
   
  
 0.743
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.