STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALMT4Aluminum-activated malate transporter 4; Malate transporter; Belongs to the aromatic acid exporter (TC 2.A.85) family. (548 aa)    
Predicted Functional Partners:
ALMT11
Putative aluminum-activated malate transporter 11; Malate transporter; Belongs to the aromatic acid exporter (TC 2.A.85) family.
      
 0.804
TDT
Tonoplast dicarboxylate transporter; Putative carrier protein indirectly involved in the uptake of malate and fumarate to the vacuole, probably by regulating the energization across the tonoplast. Uptake of malate to vacuoles is inhibited by citrate and by the uncoupler carbonyl-cyanide m- chlorophenylhydrazone, but seems to be not affected by sodium. Critical for pH homeostasis; Belongs to the SLC13A/DASS transporter (TC 2.A.47) family.
      
 0.673
PPCK1
Phosphoenolpyruvate carboxylase kinase 1; Calcium-independent kinase involved in light-dependent phosphoenolpyruvate carboxylase phosphorylation.
      
 0.651
TAF9
Transcription initiation factor TFIID subunit 9; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription.
   
   0.638
TAF10
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription. Involved in osmotic stress adaptation during the germination stage and in gene expression related to meristem activity and leaf development; Belongs to the TAF10 family.
    
 
 0.630
SGF11
SAGA-associated factor 11; Component of a deubiquitination module (DUB module) that specifically deubiquinates monoubiquinated histone H2B (H2Bub). Does not seem to be a component of the TREX-2 complex. Seems to act independently of the SAGA multiprotein complex. The DUB module is responsible for the major H2Bub deubiquitinase activity in Arabidopsis.
    
 
 0.626
DTX33
Protein DETOXIFICATION 33.
      
 0.599
UGT72B3
UDP-glycosyltransferase 72B3; Possesses low quercetin 3-O-glucosyltransferase activity in vitro.
      
 0.569
UGT72B2
UDP-glycosyltransferase 72B2; Belongs to the UDP-glycosyltransferase family.
      
 0.561
T13L16.5
Phosphatidylinositol 3-and 4-kinase family protein with FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.553
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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