STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDD14Protein indeterminate-domain 14; Transcription factor regulating starch metabolism by binding directly to the promoter of QQS. The IDD14beta isoform attenuates the transcription factor activity by competitively forming heterodimers with reduced DNA-binding capacity. Regulates lateral organ morphogenesis and gravitropic responses. Has a redundant role with IDD16 in directing leaf and floral organ morphogenesis. Involved in the establishment of auxin gradients through the regulation of auxin biosynthesis and transport. (419 aa)    
Predicted Functional Partners:
YUC5
Probable indole-3-pyruvate monooxygenase YUCCA5; Involved in auxin biosynthesis. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in roots.
      
 0.852
QQS
Protein QQS; Involved in regulating carbon and nitrogen allocation to starch and protein.
      
 0.805
LPA1
Protein LOW PSII ACCUMULATION 1, chloroplastic; Chaperone required for efficient photosystem II (PSII) assembly. Binds to psbA during de novo biogenesis of PSII.
      
 0.790
T23K23.1
Zinc finger/BTB domain protein, putative (DUF1644).
      
 0.784
SHB
SH2 domain-containing protein B.
      
 0.718
A0A1P8AQ88
Uncharacterized protein.
    
 
 0.702
AZF3
Zinc finger protein AZF3; Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.
      
 0.695
AZF1
Zinc finger protein AZF1; Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.
      
 0.695
TAA1
L-tryptophan--pyruvate aminotransferase 1; L-tryptophan aminotransferase involved in auxin (IAA) biosynthesis. Can convert L-tryptophan and pyruvate to indole-3-pyruvic acid (IPA) and alanine. Catalyzes the first step in IPA branch of the auxin biosynthetic pathway. Required for auxin production to initiate multiple change in growth in response to environmental and developmental cues. It is also active with phenylalanine, tyrosine, leucine, alanine, methionine and glutamine. Both TAA1 and TAR2 are required for maintaining proper auxin levels in roots, while TAA1, TAR1 and TAR2 are requ [...]
    
 0.623
AGL14
Agamous-like MADS-box protein AGL14; Transcriptional activator that regulates root development by controlling meristem size and patterning of the root apical meristem. Regulates auxin transport and gradients in the root meristematic cells via direct regulation of the auxin efflux carrier PIN1 and PIN4 gene expression. Binds specifically to the CArG-box DNA sequences in the promoter regions of PIN1 and PIN4 genes. Involved in the regulation of shoot apical meristem (SAM) cell identities and transitions. Promotes flowering transition and participates in flower meristem maintenance and de [...]
    
 
 0.600
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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