Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F19K16.25 | F25L23.90 | Q9CA85 | Q9LX48 | CASP-like protein (DUF1677). | Putative F-box/LRR-repeat protein At3g59230. | 0.824 |
F19K16.25 | F25P12.85 | Q9CA85 | Q9FXC1 | CASP-like protein (DUF1677). | Pectin lyase-like superfamily protein. | 0.808 |
F19K16.25 | F28K19.25 | Q9CA85 | F4I8M5 | CASP-like protein (DUF1677). | Uncharacterized protein. | 0.824 |
F19K16.25 | K17N15.8 | Q9CA85 | Q9FHN1 | CASP-like protein (DUF1677). | Ubiquitin carboxyl-terminal hydrolase-related protein. | 0.824 |
F19K16.25 | MGO3.11 | Q9CA85 | Q9LVG1 | CASP-like protein (DUF1677). | B3 domain-containing protein At5g60130. | 0.822 |
F19K16.25 | MTG10.3 | Q9CA85 | Q8GT78 | CASP-like protein (DUF1677). | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. | 0.820 |
F19K16.25 | MVA3.19 | Q9CA85 | Q9FN70 | CASP-like protein (DUF1677). | Plasma-membrane choline transporter family protein; Belongs to the CTL (choline transporter-like) family. | 0.809 |
F19K16.25 | PAP14 | Q9CA85 | Q84LR6 | CASP-like protein (DUF1677). | Probable inactive purple acid phosphatase 14; Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family. | 0.821 |
F19K16.25 | SEC1A-2 | Q9CA85 | Q9LPC3 | CASP-like protein (DUF1677). | Berberine bridge enzyme-like 1; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. | 0.793 |
F19K16.25 | T2E22.21 | Q9CA85 | Q9LHG1 | CASP-like protein (DUF1677). | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0.824 |
F25L23.90 | F19K16.25 | Q9LX48 | Q9CA85 | Putative F-box/LRR-repeat protein At3g59230. | CASP-like protein (DUF1677). | 0.824 |
F25L23.90 | F25P12.85 | Q9LX48 | Q9FXC1 | Putative F-box/LRR-repeat protein At3g59230. | Pectin lyase-like superfamily protein. | 0.807 |
F25L23.90 | F28K19.25 | Q9LX48 | F4I8M5 | Putative F-box/LRR-repeat protein At3g59230. | Uncharacterized protein. | 0.824 |
F25L23.90 | K17N15.8 | Q9LX48 | Q9FHN1 | Putative F-box/LRR-repeat protein At3g59230. | Ubiquitin carboxyl-terminal hydrolase-related protein. | 0.824 |
F25L23.90 | MGO3.11 | Q9LX48 | Q9LVG1 | Putative F-box/LRR-repeat protein At3g59230. | B3 domain-containing protein At5g60130. | 0.822 |
F25L23.90 | MTG10.3 | Q9LX48 | Q8GT78 | Putative F-box/LRR-repeat protein At3g59230. | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. | 0.820 |
F25L23.90 | MVA3.19 | Q9LX48 | Q9FN70 | Putative F-box/LRR-repeat protein At3g59230. | Plasma-membrane choline transporter family protein; Belongs to the CTL (choline transporter-like) family. | 0.806 |
F25L23.90 | PAP14 | Q9LX48 | Q84LR6 | Putative F-box/LRR-repeat protein At3g59230. | Probable inactive purple acid phosphatase 14; Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family. | 0.821 |
F25L23.90 | SEC1A-2 | Q9LX48 | Q9LPC3 | Putative F-box/LRR-repeat protein At3g59230. | Berberine bridge enzyme-like 1; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. | 0.793 |
F25L23.90 | T2E22.21 | Q9LX48 | Q9LHG1 | Putative F-box/LRR-repeat protein At3g59230. | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0.824 |
page 1 of 6