STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q9LID7_ARATHUncharacterized protein. (193 aa)    
Predicted Functional Partners:
RDL5-2
Probable cysteine protease RDL5; Possesses protease activity in vitro.
      
 0.751
XYP2
Non-specific lipid-transfer protein-like protein At2g13820; Belongs to the plant LTP family.
      
 0.740
XCP2
Cysteine protease XCP2; Cysteine protease involved in xylem tracheary element (TE) autolysis during xylogenesis in roots. Participates in micro autolysis within the intact central vacuole before mega autolysis is initiated by tonoplast implosion. Involved in susceptibility to the bacterial plant pathogen Ralstonia solanacearum.
      
 0.718
NHL10
NDR1/HIN1-like protein 10; May play a role in plant immunity.
      
 0.695
XCP1
Cysteine protease XCP1; Cysteine protease involved in xylem tracheary element (TE) autolysis during xylogenesis in roots. Participates in micro autolysis within the intact central vacuole before mega autolysis is initiated by tonoplast implosion.
      
 0.651
XYP1
Non-specific lipid-transfer protein-like protein At5g64080; Belongs to the plant LTP family.
      
 0.544
DML3
DEMETER-like protein 3; Potential transcriptional activator that may act by nicking the target promoter. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism (By similarity).
      
 0.540
DML2
DEMETER-like protein 2; Potential transcriptional activator that may act by nicking the target promoter. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism (By similarity).
      
 0.540
TED6
Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6; Involved in the secondary cell wall (SCW) formation of vessel elements (e.g. protoxylem and metaxylem), thus promoting tracheary element (TE) differentiation.
      
 0.493
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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