STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCR1Protein PLANT CADMIUM RESISTANCE 1; Involved in glutathione-independent cadmium resistance. Reduces cadmium uptake rather than activating efflux, but is not closely coupled to calcium transporter. (151 aa)    
Predicted Functional Partners:
Q147K0_ARATH
Expressed protein.
      
 0.757
Q9FKH5_ARATH
Similarity to Ta11-like non-LTR retroelement protein.
      
 0.757
UMAMIT40
WAT1-related protein At5g40240; Belongs to the drug/metabolite transporter (DMT) superfamily. Plant drug/metabolite exporter (P-DME) (TC 2.A.7.4) family.
      
 0.757
PUB54
U-box domain-containing protein 54; Functions as an E3 ubiquitin ligase.
   
  
 0.743
F3I3.20
Ubiquitin-like superfamily protein.
      
 0.725
F10K1.16
Predicted GPI-anchored protein.
      
 0.720
PANC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine to form pantothenate. Essential for panthotenate biosynthesis.
     
 0.687
LURP1
Protein LURP1; Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors (By similarity).
   
  
 0.654
MLN1.7
Phosphorelay protein.
      
 0.640
SRS1
Protein SHI RELATED SEQUENCE 1; Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apica [...]
      
 0.574
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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