STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOF5.7Dof zinc finger protein DOF5.7; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. (316 aa)    
Predicted Functional Partners:
F28L1.16
B3 domain-containing protein At3g06220.
      
 0.796
F14G24.9
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.796
AHL12
AT-hook motif nuclear-localized protein 12; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs).
      
 0.792
K1G2.10
Uncharacterized membrane protein At3g27390.
      
 0.790
LECRK92
L-type lectin-domain containing receptor kinase IX.2; Promotes hydrogen peroxide H(2)O(2) production and cell death; In the N-terminal section; belongs to the leguminous lectin family.
      
 0.760
F1N13_120
Pentatricopeptide repeat-containing protein At5g15980, mitochondrial.
      
 0.759
REM1
B3 domain-containing protein REM1; May play a role in flower development.
      
 0.740
LON3
Lon protease homolog 3, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
      
 0.740
Q8GUH9_ARATH
Transmembrane protein.
      
 0.739
MZN1.16
Zinc finger CCCH domain-containing protein 66.
      
 0.720
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.