STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
GALS2Galactan beta-1,4-galactosyltransferase GALS2; Involved in the biosynthesis of beta-1,4-galactan. Beta-1,4- galactans are abundant polysaccharides in plant cell walls and are found as side-chain of rhamnogalacturonan I, which is a major component of pectin; Belongs to the glycosyltransferase 92 family. (519 aa)    
Predicted Functional Partners:
TBL10
Protein trichome birefringence-like 10; May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity). Belongs to the PC-esterase family. TBL subfamily.
  
   
 0.799
OFUT28
O-fucosyltransferase 28; Belongs to the glycosyltransferase GT106 family.
      
 0.790
QUA3
Probable methyltransferase PMT13.
  
  
 0.752
GAUT8
Galacturonosyltransferase 8; Alpha-1-4-D-galacturonosyltransferase involved in homogalacturonan (HGA) synthesis, a class of pectin which plays a role in cell adhesion; Belongs to the glycosyltransferase 8 family.
      
 0.740
CGR2
Probable pectin methylesterase CGR2; Together with CGR3, required for homogalacturonan pectins (HG) methylesterification in the Golgi apparatus prior to integration into cell walls, essential for general growth and development. Promotes rosette growth. Impacts carbon (C) partitioning, photosynthesis and respiration efficiency by influencing leaf mesophyll cell walls morphology and physiology; pectin methylesterification modulates both expansion and positioning of cells in leaves, probably by changing cell walls plasticity.
      
 0.719
CGR3
Probable pectin methylesterase CGR3; Together with CGR2, required for homogalacturonan pectins (HG) methylesterification in the Golgi apparatus prior to integration into cell walls, essential for general growth and development. Promotes petiole elongation. Impacts photosynthesis and respiration efficiency by influencing leaf mesophyll morphology and physiology; pectin methylesterification modulates both expansion and positioning of cells in leaves, probably by changing cell walls plasticity.
      
 0.718
RGXT3
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3; Catalyzes the transfer of D-xylose from UDP-alpha-D-xylose onto L-fucose. Probably involved in the biosynthesis of rhamnogalacturonan II (RG-II) through xylosylation of the internal fucose moiety of the A-chain of RG-II, a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues such as roots and pollen tube growth and elongation.
      
 0.718
GAUT9
Probable galacturonosyltransferase 9; May be involved in pectin synthesis; Belongs to the glycosyltransferase 8 family.
      
 0.700
RGXT2
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase; Catalyzes the transfer of D-xylose from UDP-alpha-D-xylose onto L-fucose. Probably involved in the biosynthesis of rhamnogalacturonan II (RG-II) through xylosylation of the internal fucose moiety of the A-chain of RG-II, a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues such as roots and pollen tube growth and elongation; Belongs to the glycosyltransferase 77 family.
      
 0.698
ARAD2
Probable arabinosyltransferase ARAD2; Probable arabinosyl transferase responsible for the polymerization of arabinose into the arabinan of arabinogalactan. May function as inverting enzyme using UDP-beta-L-arabinopyranoside. Cell wall pectic arabinans are involved in thigmomorphogenesis response of inflorescence stems to mechanical stress.
      
 0.658
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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