STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F14F18.160Proline-rich family protein. (181 aa)    
Predicted Functional Partners:
COG3
Conserved oligomeric Golgi complex subunit 3; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. Involved in pollen tube growth by modulating Golgi morphology and vesicle trafficking homeostasis leading to the deposition of cell wall components and proteins at the pollen tube tip. Required for sporophytic development. Belongs to the COG3 family.
    
 0.986
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.986
COG4
Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function.
   
 0.986
COG1
Conserved oligomeric Golgi complex subunit 1; Required for normal Golgi function.
   
 0.985
COG5
Conserved oligomeric Golgi complex subunit 5; Required for normal Golgi function.
    
 0.976
COG2
Conserved oligomeric Golgi complex subunit 2; Required for normal Golgi morphology and function (By similarity). Ensures, when in complex with FPP3/VETH1 and FPP2/VETH2, the correct secondary cell wall (SCW) deposition pattern by recruiting exocyst components to cortical microtubules in xylem cells during secondary cell wall deposition.
    
 0.971
COG7
Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function. Necessary for embryo development and pigmentation, especially for the expansion of cells and organs, and for the formation of the organized shoot apical meristem (SAM). Probably involved in the generation of the extra-cellular matrix. Belongs to the COG7 family.
   
 0.958
GB1-2
GTP-binding protein ATGB1; Belongs to the small GTPase superfamily. Arf family.
   
 0.891
VPS45
Vacuolar protein sorting-associated protein 45 homolog; Involved in the protein transport to the vacuole, probably at the level of vesicle fusion at the trans-Golgi network (TGN) and not in transport from the TGN to the prevacuolar compartment. Binds syntaxins.
    
 0.839
VPS54
Vacuolar protein sorting-associated protein 54, chloroplastic; Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi (By similarity). Probably involved in pollen tube elongation and other polar growth; Belongs to the VPS54 family.
    
 0.836
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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