STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F9D16.140Polyketide cyclase/dehydrase and lipid transport superfamily protein. (151 aa)    
Predicted Functional Partners:
T17A5.19
DUF241 domain protein, putative (DUF241).
      
 0.908
F9D16.250
Uncharacterized protein.
      
 0.886
T12J5.70
Uncharacterized protein AT4g35200.
      
 0.881
T10I14.40
Defensin-like protein 99.
      
 0.824
B9DG73_ARATH
Adenine nucleotide alpha hydrolases-like superfamily protein.
      
 0.795
T2G17.23
Putative pathogenesis-related protein.
      
 0.792
T23E23.17
Uncharacterized protein At1g24000.
      
 0.791
QUL2
Probable methyltransferase PMT5; Belongs to the methyltransferase superfamily.
      
 0.790
ERF055
Ethylene-responsive transcription factor ERF055; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily.
      
 0.760
FMOGS-OX4
Flavin-containing monooxygenase FMO GS-OX4; Catalyzes the conversion of methylthioalkyl glucosinolates of any chain length into methylsulfinylalkyl glucosinolates. Belongs to the FMO family.
      
 0.758
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.