STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP721Vesicle-associated membrane protein 721; Involved in the targeting and/or fusion of transport vesicles to their target membrane; Belongs to the synaptobrevin family. (219 aa)    
Predicted Functional Partners:
SNAP33
SNAP25 homologous protein SNAP33; t-SNARE involved in diverse vesicle trafficking and membrane fusion processes, including cell plate formation. May function in the secretory pathway; Belongs to the SNAP-25 family.
   
 0.999
PEN1
Arabidiol synthase; Converts oxidosqualene to arabidiol. Minor production of arabidiol 20,21-epoxide; Belongs to the terpene cyclase/mutase family.
      
 0.991
SYP121
Syntaxin-121; Vesicle trafficking protein that functions in the secretory pathway; Belongs to the syntaxin family.
    
 0.989
SYP132
Syntaxin-132; Vesicle trafficking protein that functions in the secretory pathway; Belongs to the syntaxin family.
   
 0.983
SYP122
Syntaxin-122; Vesicle trafficking protein that functions in the secretory pathway.
    
 0.964
SYP71
Syntaxin-71; Vesicle trafficking protein that functions in the secretory pathway; Belongs to the syntaxin family.
   
 
 0.963
SYP24
Putative syntaxin-24; Vesicle trafficking protein that functions in the secretory pathway; Belongs to the syntaxin family.
    
 0.962
NPSN11
Novel plant SNARE 11; t-SNARE involved in diverse vesicle trafficking and membrane fusion processes, including cell plate formation; Belongs to the novel plant SNARE family.
    
 
 0.961
KAT3
Potassium channel KAT3; Probable modulatory (alpha) subunit of inward-rectifying potassium channels. Could mediate potassium uptake from the soil solution by plant roots in association with AKT1.
    
 
 0.959
KN
Syntaxin-related protein KNOLLE; Involved in cytokinesis. Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division.
    
 0.951
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.