STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T8O11.2PHD finger protein At2g01810. (697 aa)    
Predicted Functional Partners:
WRKY10
Probable WRKY transcription factor 10; Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis- acting element (By similarity). Modulates seed size by negatively regulating the cellularization of syncytial endosperm.
   
 0.813
IKU2
Receptor-like protein kinase HAIKU2; Modulates the seed size by negatively regulating the cellularization of syncytial endosperm; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
 0.809
K16L22.14
Alpha/beta-Hydrolases superfamily protein.
    
 0.804
IKU1
Protein HAIKU1; Modulates seed size by negatively regulating the cellularization of syncytial endosperm. May function by binding and modulating the activity of WRKY10 transcription factor.
      
 0.795
HOS15
WD40 repeat-containing protein HOS15; Acts as repressor of cold stress-regulated gene expression. Interacts specifically with and promotes deacetylation of histone H4. Plays a role in gene regulation for plant acclimation and tolerance to cold stress.
    
 
 0.677
F8A5.22
SMAD/FHA domain-containing protein.
    
 0.622
F10A5.25
Forkhead-associated (FHA) domain-containing protein.
    
 0.622
emb1967
Forkhead-associated (FHA) domain-containing protein.
    
 0.622
HAM1
Histone acetyltransferase of the MYST family 1; Histone acetyltransferase which may be involved in transcriptional activation. Acetylates 'Lys-5' of histone H4 (H4K5ac). Essential for gametophyte development. Involved in DNA repair after UV-B exposure. Negative regulator of flowering controlling the H4K5ac levels in the FLC chromatin.
    
 0.594
HAM2
Histone acetyltransferase of the MYST family 2; Histone acetyltransferase which may be involved in transcriptional activation. Acetylates 'Lys-5' of histone H4 (H4K5ac). Essential for gametophyte development. Negative regulator of flowering controlling the H4K5ac levels in the FLC chromatin. Belongs to the MYST (SAS/MOZ) family.
    
 0.594
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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