STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSUP00005000293annotation not available (371 aa)    
Predicted Functional Partners:
LIPT1
Lipoyltransferase 1.
  
 
 0.925
LIPT2
Lipoyl(octanoyl) transferase 2.
 
 
 0.922
ENSSSUP00005009507
annotation not available
 
 
 0.814
ENSSSUP00005019930
annotation not available
 
 
 0.814
KCNE3
Potassium voltage-gated channel subfamily E regulatory subunit 3.
  
 
 0.789
SMIM14
Small integral membrane protein 14.
      
 0.628
RBM47
RNA binding motif protein 47.
      
 0.614
NFU1
NFU1 iron-sulfur cluster scaffold.
  
 
 0.579
ENSSSUP00005020750
annotation not available
     
 0.551
SLC18A1
Solute carrier family 18 member A1.
      
 0.538
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.