STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCN1Chloride voltage-gated channel 1. (991 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
      
 0.775
MBNL1
Muscleblind like splicing regulator 1.
      
 0.742
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
 0.700
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
  
 0.638
BSND
Barttin CLCNK type accessory beta subunit.
   
 
 0.633
MBNL3
Muscleblind like splicing regulator 3.
      
 0.627
MBNL2
Muscleblind like splicing regulator 2.
      
 0.623
ATP2A1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
   
  
 0.623
DMPK
DM1 protein kinase.
      
 0.617
CRBN
Cereblon.
    
 
 0.607
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.