STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPER3Cation channel sperm associated 3. (400 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.997
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
    
 0.996
EFCAB9
EF-hand calcium binding domain 9.
  
 
 0.994
ENSSSUP00005022697
annotation not available
  
 
0.993
CATSPER2
Cation channel sperm associated 2.
  
 
0.993
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.989
CATSPER4
Cation channel sperm associated 4.
  
 
0.986
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.975
ENSSSUP00005033049
annotation not available
    
 0.975
ENSSSUP00005002003
annotation not available
    
 0.973
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.