STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC138Coiled-coil domain containing 138. (667 aa)    
Predicted Functional Partners:
CCDC186
Coiled-coil domain containing 186.
      
 0.804
RABL6
RAB, member RAS oncogene family like 6.
      
 0.797
CCDC22
Coiled-coil domain containing 22.
      
 0.778
VPS52
VPS52 subunit of GARP complex.
      
 0.774
VPS54
VPS54 subunit of GARP complex.
      
 0.765
ENSSSUP00005014405
annotation not available
      
 0.756
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
      
 0.741
ENSSSUP00005029231
annotation not available
      
 0.741
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.617
VPS51
VPS51 subunit of GARP complex.
      
 0.616
Your Current Organism:
Suricata suricatta
NCBI taxonomy Id: 37032
Other names: S. suricatta, meerkat, slender-tailed meerkat, suricate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.